MINIMUM HAUSDORFF DISTANCE UNDER RIGID MOTIONS AND COMPARISON OF PROTEIN STRUCTURES

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摘要 Hausdorffdistancebetweentwocompactsets,definedasthemaximumdistancefromapointofonesettoanotherset,hasmanyapplicationincomputerscience.Itisagoodmeasureforthesimilarityoftwosets.ThispaperprovesthattheshapedistancebetweentwocompactsetsinR~ndefinedbyminimumHausdorffdistanceunderrigidmotionsisadistance.Theauthorsintroducesimilaritycomparisonproblemsinproteinscience,andproposethatthismeasuremayhavegoodapplicationtocomparisonofproteinstructureaswell.Forcalculationofthisdistance,theauthorsgiveonedimensionalformulasforproblems(2,n),(3,3),and(3,4).Theseformulascanreducetimeneededforsolvingtheseproblems.Theauthorsdidsomenumericalexperimentsfor(2,n).Onthesesetsofdata,thisformulacanreducetimeneededtoonefifteenthofthebestalgorithmsknownonaverage.Asnincreases,itwouldsavemoretime.
机构地区 不详
出版日期 2009年04月14日(中国期刊网平台首次上网日期,不代表论文的发表时间)
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